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INDEXED
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SequenceFile
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IGVFFI4367MEQN
IGVFFI4367MEQN
preview
validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1790XLZR
(scATAC-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
maya-kasowski:Scale_scATAC_lane1_R1
md5sum
9e2b2644c43b54541f6125462d4a6054
Content MD5sum
7b3b0d8946c7e30533c9666ff0ed63f0
File Size
36 GB
Submitted File Name
/users/shouvikm/data/Scale/SCALE_leukemia_01202023/fastqs_after_scATAC_Scale_pipeline/S701-S706/S701/S701P_S1_L003_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Maya Kasowski, Stanford
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
86.33
Read Count
560445955
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1625LLXE
MultiplexedSample
bone marrow
multiplexed sample: Homo sapiens bone marrow cell; Homo sapiens (female) bone marrow cell; ... and 21 more samples