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INDEXED
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SequenceFile
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IGVFFI4364TZKG
IGVFFI4364TZKG
released
validated
Json view
File Set
IGVFDS7635GZJI
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8477
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8477_R1
md5sum
d94038dc43b2ab4446b80ce8174d5882
Content MD5sum
8f4b1ea6300b520148ef69e2d56a9e0d
File Size
683 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2307_L1_SS-PKR-182_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8477
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
15461397
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2051NVYB
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 182)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2148FIED
yaml
seqspec
seqspec of IGVFFI4364TZKG, IGVFFI3614ICCF, IGVFFI7041QQBW
Jason Buenrostro, Broad
1.3 KB
validated