IGVFFI4360PXKO

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9885KGYZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP033_G1_P080_L008_I1

md5sum

c3c9db1ae9942c231a08262c63119ded

Content MD5sum

860912756f2188643db696ec91d75b15

File Size

1.2 GB

Submitted File Name

Multiome_RNA_RP033_G1_L001_P080_S53_L008_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19NHCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

152579889

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6670KYMT

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, Parkinson's disease

multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) substantia nigra tissue associated with Parkinson's disease; ... and 6 more samples