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SequenceFile
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IGVFFI4338AAEG
IGVFFI4338AAEG
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS0217CJQJ
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 390
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX3-SC2_snRNA_S1_R1
md5sum
46a13bf83fd322d9a51d9b92ef38b402
Content MD5sum
2f0ccb9801827be6c2e4f7a747480985
File Size
5.9 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX3-SC2/AHM2T2DSX2/XHLT1-POOL-XX3-SC2-GEX_S10_L002_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
390
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
178380772
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4434DRKC
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 53.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; ... and 18 more samples