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INDEXED
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SequenceFile
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IGVFFI4327NMJP
IGVFFI4327NMJP
released
validated
Json view
File Set
IGVFDS5279MFDZ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3994
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3994_R1
md5sum
49616dcc63a430035c70db8e9af972a7
Content MD5sum
d501d2f514e1293c80ab6a9af69fb3df
File Size
668 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-711_L7_SS-PKR-206_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3994
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
12160019
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6043MNJX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 206)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3993RPMY
yaml
seqspec
seqspec of IGVFFI4327NMJP, IGVFFI3841OHOE, IGVFFI7404USJI
Jason Buenrostro, Broad
1.4 KB
validated