IGVFFI4326LURT

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2903AZNH(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP001_G7_P052_L001_R1

md5sum

3ab8ee19ca2d06fafda0e6371cf34528

Content MD5sum

b80f27ed9d00b182fd629cc32dcded1a

File Size

644 MB

Submitted File Name

Multiome_RNA_RP001_G7_L007_P052_S7_L001_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

32383962

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8255WJLC

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples