IGVFFI4313GUEE

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8353JJNR(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP007_G3_P056_L008_I2

md5sum

a1554617ff09f0318937d8bb9ec60a2e

Content MD5sum

cf195ee17d4fd07cd07d1c9eb1ee80e8

File Size

305 MB

Submitted File Name

Multiome_RNA_RP007_G3_L003_P056_S90_L008_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JHVLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

53160123

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7646ONHX

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples