IGVFFI4293ZZYI

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6877VUOV(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP005_G2_P054_L006_R2

md5sum

dc74aa1378ee5f8452daad9f0f7bc020

Content MD5sum

1a64fb32853867b8f04f9c59634f5a1b

File Size

2.5 GB

Submitted File Name

Multiome_RNA_RP005_G2_L002_P054_S37_L006_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

58792282

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7731BQTB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples