IGVFFI4290XIZD

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7859TASD(CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:240908-S029-PPIF_5SpliceSite-IndividualVariantExp-AGGT_TCCA-THP1-BioRep1-FFrep1-FACS_Input-PCRrep2_R1
md5sum
756953ae2d0c54934da45564839032fd
Content MD5sum
db409e0e82933ace9fef7eff0bfdf8b3
File Size
39 MB
Submitted File Name
240908-S029-5splice-THP1-5splicesite_C10-Amp_PPIF_5splicesite-BioRep1-FFrep1-BinAll-PCRrep2_S979_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
1
Illumina Read Type
R1
Index
GTCTGATG:AGGTGCGT
Average Read Length
151
Read Count
1856418

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

Attribution