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INDEXED
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SequenceFile
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IGVFFI4288WBKI
IGVFFI4288WBKI
released
validated
Json view
File Set
IGVFDS2590SMEJ
(RNA-seq)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-bulk-rna-chir4um-ipsc-cm-rep3-R2
md5sum
5d66f2a79ae8f5cd7fa82554974fce0a
Content MD5sum
d49d74fcefef49003b9b0e43ab954918
File Size
3.0 GB
Submitted File Name
/datacommons/gersbachlab/tda17/Anglen_7276_210923B6_RNAseq/data/rna_seq/processed_raw_reads/Anglen_7276_210923B6_RNAseq/chir4um.3.rna.R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Charles Gersbach, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
150
Read Count
36593034
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2298AOEQ
InVitroSystem
GM25256 (WTC-11)
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days treated with 4 μM GSK3 inhibition for 7 days
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8503OKYN
bam
transcriptome alignments
GRCh38 filtered transcriptome alignments
Charles Gersbach, Duke
2.5 GB
validated