IGVFFI4260MTPR

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8384PDHI(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X048_G3_P050_L002_R1

md5sum

8e245d3596603c8d1608b516bf74557e

Content MD5sum

1bf3ddb23ba926662aeca29534b86ddd

File Size

9.4 GB

Submitted File Name

Multiome_RNA_X048_G3_L003_P050_S19_L002_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H7VW3DSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

101

Read Count

143101758

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0811HBAI

MultiplexedSample

posterior cingulate gyrus, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 93 years) substantia nigra tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples