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INDEXED
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SequenceFile
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IGVFFI4254DMVD
IGVFFI4254DMVD
released
validated
Json view
File Set
IGVFDS7101YHDI
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 1435
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1435_R2
buenrostro-bernstein:SS-LS_1435_R2
md5sum
907f52ab87e07984eef7f1ee0945d024
Content MD5sum
70bcae5cd9921264cfb8ecc5b9bbba03
File Size
97 KB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1124_L1_SS-PKR-6_SS-V1-1st-THIRD_R2.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1435
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
1853
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4055GPWI
PrimaryCell
bone marrow
bone marrow cell (cellular sub pool: SS-PKR 6), male, Homo sapiens (26 years)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad