Home

IGVFFI4252XXXZ

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1004SBHR(gRNA sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci)
Summary
R1 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
gary-hon:LW271B_1_R1
md5sum
cde5518bbb12980e59ff4b0c3f61d0c3
Content MD5sum
3294809caf93c86c71a209b3a0454557
File Size
458 MB
Submitted File Name
/project/GCRB/Hon_lab/shared/data/sequencing_data/2023/2023-12-22-McDermott-NextSeq.10X/2023-12-22/outs/fastq_path/AAF5CKNM5//LW271B_S9_L001_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
2
Flowcell ID
AAF5CKNM5
Lane
1
Illumina Read Type
R1
Average Read Length
28
Read Count
21029766

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
H9 differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW271), female, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library

Attribution

Award
HG011996
Principal Investigator(s)
Contact P.I.
Gary Hon
Lab
Gary Hon, UT