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IGVFFI4250TBNL

released
validated
File Set
IGVFDS4195RKHK(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2378
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2378_R1
buenrostro-bernstein:SS-LS_2378_R1
md5sum
e4baebacd8bd7899c88e8ca3732f1907
Content MD5sum
4a1d557218917f12426173f2f2400006
File Size
256 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-46_L2_SS-PKR-4_SS-V2-PLATE2-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2378
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
12688553

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (29 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad