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INDEXED
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SequenceFile
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IGVFFI4249ZULU
IGVFFI4249ZULU
released
validated
Json view
File Set
IGVFDS4418VLDF
(snM3C-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C39_day1_L7_R2
md5sum
86da49f97d0f74e2334ef11336a3b2e2
Content MD5sum
f6071b13be06b52c3d20205b7721f6e4
File Size
2.9 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl47/20231005-3C39D1-Pos1-B03_S13_L007_R2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
2
Lane
7
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
148.97
Read Count
39070469
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0523BGBM
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA