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INDEXED
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SequenceFile
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IGVFFI4245TOCC
IGVFFI4245TOCC
released
validated
Json view
File Set
IGVFDS2660YHFN
(snMCT-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snmct_C29_day14_L1_R1
md5sum
26dac87cc8f87eed4a35b7077d4ec80e
Content MD5sum
08d44036b2a4c34261d64181bd34fcd9
File Size
5.4 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snmct/yzcl51/20231204-C29D14-Pos1-B01_S13_L001_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
1
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
148.95
Read Count
71271527
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9932FZKJ
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 14 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA