Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Resources
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI4223YEUL
IGVFFI4223YEUL
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS0424WDCP
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 81
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX11-SC1_snRNA_S2_R2
md5sum
f3a2ca8a50c2a6827b6baabf055178f9
Content MD5sum
306d881fd72e6660454d2cb36fe176f1
File Size
8.0 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX11-SC1/BHM2MWDSX2/XHLT1-POOL-XX11-SC1-GEX_S7_L003_R2_001.fastq.gz
Checkfiles Version
v17
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
81
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
90
Read Count
170529425
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8525WUDY
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 25.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 62.0 years) peripheral blood mononuclear cell; ... and 17 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF