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SequenceFile
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IGVFFI4210DJRQ
IGVFFI4210DJRQ
released
validated
Json view
File Set
IGVFDS3673RLHA
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4371
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4371_R1
md5sum
63503fe3f2c937908f8812755fb8e409
Content MD5sum
2b55207fef321294528c7353097ee824
File Size
1.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-560_L2_SS-PKR-208_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4371
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
21321880
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5530BECA
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 208)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0349APXU
yaml
seqspec
seqspec of IGVFFI4210DJRQ, IGVFFI7573QEQO, IGVFFI1500FJZD
Jason Buenrostro, Broad
1.3 KB
validated