IGVFFI4207NYCN

released
validated
{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI4207NYCN/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI4207NYCN",
    "aliases": [
        "jesse-engreitz:auxiliary_file_CRUDO_MYC-Auxin6hrs-FF2-BinF-PCR4_Rep1_S158"
    ],
    "audit": {},
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "30a6db341c3337fb990ad520aa47f1bc",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2024-06-01T02:08:24.763839+00:00",
    "file_format": "fastq",
    "file_set": "/auxiliary-sets/IGVFDS6660JNZU/",
    "file_size": 25459713,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI4207NYCN/@@download/IGVFFI4207NYCN.fastq.gz",
    "index": "TAATGAAC:TTGA",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 21,
    "md5sum": "f43f7c0c93042244519dcb94d5cf747a",
    "mean_read_length": 21,
    "minimum_read_length": 21,
    "read_count": 1310954,
    "release_timestamp": "2024-07-10T20:22:11.940414+00:00",
    "s3_uri": "s3://igvf-files/2024/06/01/807e3677-97f5-4048-bb74-072c0a5e8c7f/IGVFFI4207NYCN.fastq.gz",
    "schema_version": "14",
    "seqspecs": [
        "/configuration-files/IGVFFI3737AKUY/"
    ],
    "sequencing_platform": "/platform-terms/EFO_0008565/",
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/100f06c6-83a7-4b4d-9dfd-053a1829773b/",
        "title": "Benjamin Doughty"
    },
    "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/220819B015_MYC/fastq_trim/MYC-Auxin6hrs-FF2-BinF-PCR4-Rep1_S158_R1_001.fastq.gz",
    "summary": "reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "807e3677-97f5-4048-bb74-072c0a5e8c7f"
}