Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI4188BVSG
IGVFFI4188BVSG
released
validated
Json view
File Set
IGVFDS6289YQBN
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3818
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3818_R1
md5sum
44a740ee5526d57b7104e88c731f809d
Content MD5sum
f98fd423fec5106575f496313a5d24de
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1539_L1_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3818
Flowcell ID
H22KKDRX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
22369342
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4735KTCJ
yaml
seqspec
seqspec of IGVFFI4188BVSG, IGVFFI0846GWZX
Jason Buenrostro, Broad
1.3 KB
validated