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INDEXED
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SequenceFile
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IGVFFI4184QDHJ
IGVFFI4184QDHJ
released
validated
Json view
File Set
IGVFDS1149ZGJI
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8376
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8376_R1
md5sum
d83f19bfa85cb6cba03a791226ad4d43
Content MD5sum
f8fb8556c668cd1fc0ed2c8b56ba1319
File Size
2.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2256_L4_SS-PKR-605_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8376
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
69597116
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5413AOMQ
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 605)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5698PWWS
yaml
seqspec
seqspec of IGVFFI4184QDHJ, IGVFFI2344WJQL
Jason Buenrostro, Broad
1.3 KB
validated