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IGVFFI4166FQWH

released
validated
File Set
IGVFDS1555ZQOW(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
R3 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_exp1_atac_10x1_NGS1_r3
md5sum
42fb9a727ba8f1566d5166a42dcfa8bb
Content MD5sum
1ee7490d4bdfbd3c167e191f2c888ded
File Size
8.5 GB
Submitted File Name
/oak/stanford/projects/igvf/Projects/230522_IGVF1_McGinnis/ATAC/FASTQ/ATAC_1_S358_L007_R3_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ansuman Satpathy, Stanford

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
2257H3LT3
Lane
7
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R3
Average Read Length
50
Read Count
288349842

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) HAP-1 cell line; Homo sapiens (male) HAP-1 cell line; ... and 13 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Ansuman Satpathy, Stanford
3.5 GB
validation exempted

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI1415ZCCR, IGVFFI9193AKLW, IGVFFI4166FQWH, IGVFFI9476DBSV
Ansuman Satpathy, Stanford
1.4 KB
validated