IGVFFI4165QNEC

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9457JYRY(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP023_G1_P068_L003_I2

md5sum

5911e37c6b42731423483ea0193cb916

Content MD5sum

72f64911bad23dfcfde5a194f0581a65

File Size

444 MB

Submitted File Name

Multiome_RNA_RP023_G1_L001_P068_S13_L003_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

2257GYLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

80489388

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3608VEWP

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 52 years) posterior cingulate gyrus tissue; Homo sapiens (male, 87 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples