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INDEXED
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SequenceFile
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IGVFFI4162IEKJ
IGVFFI4162IEKJ
released
validated
Json view
File Set
IGVFDS6777QJMP
(reporter library targeting random selections genome-wide)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P008-R2
md5sum
95122c5930eaa5b1b9ec60b4c16433e3
Content MD5sum
5f802f1f5e269400f5ff5c8c1108d230
File Size
7.6 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool8.R2.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKFM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R2
Average Read Length
301
Read Count
49534982
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0924DYUU
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
6.7 GB
validated
IGVFFI5912UDSB
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
7.0 GB
validated