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IGVFFI4155YXXY

released
validated
File Set
IGVFDS5975CQWW(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 8
File Format
fastq
Content Type
reads
md5sum
d337de8cf9dc9191277270e1dd0f63b1
Content MD5sum
b263f7a83be8ab7103f57022a512dcca
File Size
10 GB
Submitted File Name
igvf_004/nova2/igvf_004_B12_D_nova_N2_L004_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
8
Flowcell ID
HTGM5DSX5
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
141092393

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus CAST/EiJ (male, 69 days) liver tissue; Mus musculus 129S1J (female, 72 days) heart tissue; ... and 126 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.5 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI4155YXXY, IGVFFI6106QSFU
Ali Mortazavi, UCI
1.4 KB
validated