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SequenceFile
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IGVFFI4154TLQF
IGVFFI4154TLQF
released
validated
Json view
File Set
IGVFDS4165XBTP
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4419
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4419_R1
md5sum
3ec207ba50e68742df0615037e49af0f
Content MD5sum
6d546ec31c2d2c4ea55238512ef122d9
File Size
11 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1487_L8_SS-PKR-178_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4419
Flowcell ID
22JMFMLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
254090820
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6714ZQAO
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 178)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0323AYHW
yaml
seqspec
seqspec of IGVFFI4154TLQF, IGVFFI0515TOGL, IGVFFI5796JEGI
Jason Buenrostro, Broad
1.3 KB
validated