{
"@context": "/terms/",
"@id": "/sequence-files/IGVFFI4151NBWZ/",
"@type": [
"SequenceFile",
"File",
"Item"
],
"accession": "IGVFFI4151NBWZ",
"aliases": [
"jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-BinD-PCRrep12_I2"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI4151NBWZ](/sequence-files/IGVFFI4151NBWZ/) has in progress subobject auxiliary set [IGVFDS3190HKSW](/auxiliary-sets/IGVFDS3190HKSW/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI4151NBWZ/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "10ac6c512a91267168545448c16c0566",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-05T20:40:03.097083+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS3190HKSW/",
"file_size": 1436871,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI4151NBWZ/@@download/IGVFFI4151NBWZ.fastq.gz",
"illumina_read_type": "I2",
"index": "TTAATCAG:GTCA",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 4,
"md5sum": "8b623df1b136900bb2a18d8a6a9d82ca",
"mean_read_length": 4,
"minimum_read_length": 4,
"read_count": 173052,
"release_timestamp": "2023-12-20T23:40:20.700030+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/9f19153c-31ff-4e00-ae0c-0ce09e06df9e/IGVFFI4151NBWZ.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-BinD-PCRrep12_S144_I2_001.fastq.gz",
"summary": "I2 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "9f19153c-31ff-4e00-ae0c-0ce09e06df9e"
}