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INDEXED
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SequenceFile
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IGVFFI4139IHFB
IGVFFI4139IHFB
released
validated
Json view
File Set
IGVFDS5177YHMM
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 3808
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3808_R2
md5sum
36f4a231b2905db33d21f9380278881a
Content MD5sum
ce8d3b32ad1176e2074cddac77525da0
File Size
1.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1537_L1_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3808
Flowcell ID
H22KKDRX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
15171888
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9471PHWP
yaml
seqspec
seqspec of IGVFFI6997HAKK, IGVFFI4139IHFB
Jason Buenrostro, Broad
1.3 KB
validated