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INDEXED
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SequenceFile
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IGVFFI4137QBLX
IGVFFI4137QBLX
preview
validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS6624LIQT
(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 155
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX13-SC1_snATAC_S2_R3
md5sum
cbcc039be637c587cdc582f99b233f48
Content MD5sum
73ef5fdeb8146c7c868ed3efb4abeaaf
File Size
7.8 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX13-SC1/AHFFGGDSX2/XHLT1-POOL-XX13-SC1-ATAC_S15_L003_R3_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
155
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
90
Read Count
158383770
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9333JIPE
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 33.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 55.0 years) peripheral blood mononuclear cell; ... and 18 more samples