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INDEXED
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SequenceFile
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IGVFFI4135YTZB
IGVFFI4135YTZB
released
validated
Json view
File Set
IGVFDS1011YMSG
(snM3C-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C29_day5_L7_R2
md5sum
5035c9da91f73e67c1a1f6ec53cb735a
Content MD5sum
dd55ddf63940f6b69c9435e3625e0516
File Size
3.3 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl46/20230918-3C29D5-Pos1-B01_S9_L007_R2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
2
Lane
7
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
149.26
Read Count
48297278
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2376KHRW
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 5 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA