IGVFFI4129FGNP

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2300TLPU(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP011_G7_P060_L006_I2

md5sum

ae48c9e9604ade6c12a89e4e7aa0fe51

Content MD5sum

586019faa011fc7f87e8b9aef0ce0a5e

File Size

516 MB

Submitted File Name

Multiome_RNA_RP011_G7_L002_P060_S26_L006_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

85833802

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5471WRIH

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 53 years) middle temporal gyrus tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 14 more samples