Home

IGVFFI4119SRLT

released
validated
File Set
IGVFDS7609ZEMW(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 2379
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2379_R1
buenrostro-bernstein:SS-LS_2379_R1
md5sum
96bf4868bfa017f6be005b9f463c9b99
Content MD5sum
714112941f778076062b2ddf224b83fd
File Size
494 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-47_L2_SS-PKR-4_SS-V2-PLATE2-3rd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2379
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
18563360

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (37 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad