Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI4116HUZF
IGVFFI4116HUZF
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS6437RSOG
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 290
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX2-SC2_snRNA_S1_R1
md5sum
818a75a483453818f2896df32fa543ce
Content MD5sum
52cacb1e4454a5b0c4f169fb147e0296
File Size
5.8 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX2-SC2/AHM2T2DSX2/XHLT1-POOL-XX2-SC2-GEX_S6_L002_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
290
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
171545222
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1747QIBH
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 27.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 54.0 years) peripheral blood mononuclear cell; ... and 17 more samples