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INDEXED
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SequenceFile
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IGVFFI4105LPRJ
IGVFFI4105LPRJ
released
validated
Json view
File Set
IGVFDS0635LULZ
(snM3C-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C39_day16_L5_R1
md5sum
5509b51f2d31044684495c7d574b0d44
Content MD5sum
36f9423529abcf59e84bf41ff0b8403c
File Size
2.7 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl48/20231016-3C39D16-Pos1-A12_S11_L005_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
5
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
147.84
Read Count
39973976
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9563MBMI
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 16 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA