Home

IGVFFI4099CVIC

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3761ALRH(single-nucleus ATAC-seq (10x multiome))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X034_G2_P033_L001_R2
md5sum
7c2ad455091990dfad25425243f218bf
Content MD5sum
5d3018f08f20afde4db5a34a50b629d1
File Size
4.0 GB
Submitted File Name
Multiome_ATAC_X034_G2_L002_P033_S12_L001_R2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
H2WFTDSX7
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
24
Read Count
225456038

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 80 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 80 years) cerebellar cortex tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; ... and 10 more samples