Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI4098GXZL
IGVFFI4098GXZL
released
validated
Json view
File Set
IGVFDS3890CXMU
(single-cell RNA sequencing assay (SHARE-seq))
Summary
I1 reads from sequencing run 3
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS15-prim-5K-RNA.barcode.fastq.gz
md5sum
0887c986d4f8f736faefa10df26c5815
Content MD5sum
8d270fbb654db6ff877460e8cd18ab40
File Size
965 MB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/barcode-file/DSS15-prim-5K-RNA.barcode.fastq.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
32
Read Count
44474798
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4720VFLQ
PrimaryCell
colon
Mus musculus C57BL/6J colon cell
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4610FKZE
yaml
seqspec
seqspec of IGVFFI9969IOJU, IGVFFI4597FDTJ, IGVFFI4098GXZL
Jason Buenrostro, Broad
1.2 KB
validated