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INDEXED
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SequenceFile
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IGVFFI4097NVZS
IGVFFI4097NVZS
released
validated
Json view
File Set
IGVFDS4752BWME
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 7379
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7379_R2
md5sum
f901c478d4ec71904ed9f0c0528f02d2
Content MD5sum
8e5bd4469d644563d319b7f02900ed67
File Size
14 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1918_L8_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7379
Flowcell ID
22KFF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
195034153
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5343SBVQ
yaml
seqspec
seqspec of IGVFFI1714BGQB, IGVFFI4097NVZS
Jason Buenrostro, Broad
1.3 KB
validated