IGVFFI4080EPAW

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2585XWPY(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP007_G5_P056_L004_I2

md5sum

6d8ba13365aaac74a4b318fa777206ad

Content MD5sum

8d4f5e942fca87e75e3eb293b4a16cf5

File Size

478 MB

Submitted File Name

Multiome_RNA_RP007_G5_L005_P056_S33_L004_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

225LGWLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

74997930

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2276WIKG

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples