IGVFFI4079YFGF

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5273QVEC(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP002_G7_P052_L004_R1

md5sum

4a24c4cf4c2440f7dd2d5942118e7e91

Content MD5sum

304c805e630751f9dd3a2825dae891b7

File Size

1.6 GB

Submitted File Name

Multiome_RNA_RP002_G7_L007_P052_S15_L004_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

83700331

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2339RJIS

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 73 years) putamen tissue; Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples