IGVFFI4065LZMW

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9129KQZH(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP012_G1_P060_L007_I1

md5sum

d92aeb5fd4e7e15bde02ebef32096519

Content MD5sum

efc3049a60a7490033e37dfb68f33e43

File Size

353 MB

Submitted File Name

Multiome_RNA_RP012_G1_L001_P060_S33_L007_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

63720019

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3122KACM

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) substantia nigra tissue; ... and 14 more samples