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SequenceFile
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IGVFFI4056MDOS
IGVFFI4056MDOS
released
validated
Json view
File Set
IGVFDS9590NQAN
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9144
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9144_R1
md5sum
24415df2920766da16a18c13d737abc0
Content MD5sum
cfa82e17aa02c65a048610cb85cf6bc4
File Size
987 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2302_L8_SS-PKR-180_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9144
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
22112983
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4941CPCX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 180)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6311FHJD
yaml
seqspec
seqspec of IGVFFI4056MDOS, IGVFFI0027YWPP, IGVFFI6752ZZAG
Jason Buenrostro, Broad
1.3 KB
validated