Home

IGVFFI4049XVCT

released
validated
File Set
IGVFDS0650LFIN(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 6
File Format
fastq
Content Type
reads
md5sum
9031ecc1d6d2cdf1d3b90fce7fd99e7c
Content MD5sum
2b3ed6155f1512f892b250fd2f89fcec
File Size
14 GB
Submitted File Name
igvf_005/nova2/igvf_005_B04_D_nova_N2_L002_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
6
Flowcell ID
HVYNYDSX5
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
212416267

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NOD/ShiLtJ (female, 72 days) pituitary gland tissue; Mus musculus CAST/EiJ (female, 69 days) pituitary gland tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.8 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI4049XVCT, IGVFFI2728SOEX
Ali Mortazavi, UCI
1.3 KB
validated