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INDEXED
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SequenceFile
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IGVFFI4045FOCZ
IGVFFI4045FOCZ
released
validated
Json view
File Set
IGVFDS8815ZJNW
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 886
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_886_R1
md5sum
8cc72aebf654b65342a00d28310ff4fc
Content MD5sum
fdf367ac5f4bfa53d7ab801e17bfe0b8
File Size
596 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-899_L6_SS-PKR-178_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
886
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
9684213
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0270BBYP
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 178)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2816XILC
yaml
seqspec
seqspec of IGVFFI4045FOCZ, IGVFFI4145WDTG, IGVFFI1621KEND
Jason Buenrostro, Broad
1.4 KB
validated