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INDEXED
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SequenceFile
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IGVFFI4043QHOA
IGVFFI4043QHOA
released
validated
Json view
File Set
IGVFDS0937CDYE
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1047
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_1047_R1
md5sum
3529b714e4a17bf6e58c9178dfc48753
Content MD5sum
2988496a87ad0111d22dd10ee603b85b
File Size
170 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-934_L4_SS-PKR-171_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1047
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
3029660
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9938KYSQ
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 171)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6252OWFW
yaml
seqspec
seqspec of IGVFFI4043QHOA, IGVFFI2224YQOM, IGVFFI3375JXVW
Jason Buenrostro, Broad
1.3 KB
validated