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INDEXED
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SequenceFile
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IGVFFI4040KVJA
IGVFFI4040KVJA
released
validated
Json view
File Set
IGVFDS6289YQBN
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3842
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3842_R1
md5sum
d736f1f9786141df8c8243a812335330
Content MD5sum
4d3de34bd5594157409cbf5cc36e7ca4
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1539_L2_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3842
Flowcell ID
H22KKDRX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
22945075
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9557CSJM
yaml
seqspec
seqspec of IGVFFI4040KVJA, IGVFFI8647WTOX
Jason Buenrostro, Broad
1.3 KB
validated