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IGVFFI4036POXY

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS0861MZYT(prime editing Variant-EFFECTS sorted on the expression of PPIF)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:240908-S029-PPIF_5SpliceSitePool-THP1-PE2_Exp6_NegControl-PCRrep4_R2
md5sum
66299a06b40e28b6e24b27cf9bd9146b
Content MD5sum
589eddbd7d293485ae2117d355158122
File Size
32 MB
Submitted File Name
240908-S029-5splice-THP1-5splicesite_pool-Amp_PPIF_5splicesite-BioRep1-FFrep2-BinNeg-PCRrep2_S998_R2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Illumina Read Type
R2
Index
CCTTCGCA:AGGTGCGT
Average Read Length
151
Read Count
1626642

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
variant effects
variant effects
Jesse Engreitz, Stanford
369 B
validated

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford