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IGVFFI4036POXY

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS0861MZYT(prime editing Variant-EFFECTS)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:240908-S029-PPIF_5SpliceSitePool-THP1-PE2_Exp6_NegControl-PCRrep4_R2
md5sum
66299a06b40e28b6e24b27cf9bd9146b
Content MD5sum
589eddbd7d293485ae2117d355158122
File Size
32 MB
Submitted File Name
240908-S029-5splice-THP1-5splicesite_pool-Amp_PPIF_5splicesite-BioRep1-FFrep2-BinNeg-PCRrep2_S998_R2_001.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Illumina Read Type
R2
Index
CCTTCGCA:AGGTGCGT
Average Read Length
151
Read Count
1626642

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
variant effects
variant effects
Jesse Engreitz, Stanford
pending

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford