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INDEXED
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SequenceFile
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IGVFFI4034UCLF
IGVFFI4034UCLF
released
validated
Json view
File Set
IGVFDS5083GBBF
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 7336
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7336_R1
md5sum
3529a241e168e96687c893a711714a75
Content MD5sum
84910a013f6d88a3b0bba076761d3755
File Size
6.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1913_L6_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7336
Flowcell ID
22KFF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
168271909
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3248DTTM
yaml
seqspec
seqspec of IGVFFI4034UCLF, IGVFFI1173DRYT
Jason Buenrostro, Broad
1.3 KB
validated