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IGVFFI4026VSPS

released
validated
File Set
IGVFDS3341DMCU(Proliferation CRISPR interference screen integrating a guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
guillaume-lettre:BP_screen_KRAB_PROLIF_R3_2_read2
md5sum
c492ab0384501f3d714f0a6958d69b9e
Content MD5sum
0b4d174aa3cb68c3af57fd0dd8ec3bc2
File Size
1.5 GB
Submitted File Name
/home/lokensin/projects/rrg-glettre/sequencing_datastore/raw_data/CRISPR_IGVF_20230720/samples/NS.X0085.005.IndexR1_07.P2BPR3_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 SP Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
151
Read Count
24948726

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
TeloHAEC cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
csv
guide quantifications
guide quantifications
Guillaume Lettre, MHI
149 KB
validated

Attribution

Award
HG012010
Principal Investigator(s)
Contact P.I.
Luca Pinello
Lab
Guillaume Lettre, MHI