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INDEXED
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SequenceFile
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IGVFFI4017LTEF
IGVFFI4017LTEF
released
validated
Json view
File Set
IGVFDS4886GWPA
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 8303
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8303_R2
md5sum
9bf5cb8c4f02245930ae660b54fd2dd6
Content MD5sum
925133dd6461f3ef5cd4a03cdab386ce
File Size
8.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2173_L6_SS-PKR-533_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8303
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
111471429
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1072XOVT
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 533)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7160GJNZ
yaml
seqspec
seqspec of IGVFFI6399EKWI, IGVFFI4017LTEF
Jason Buenrostro, Broad
1.3 KB
validated