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IGVFFI4010FPRN

released
validated
File Set
IGVFDS1560LMQZ(scATAC-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jay-shendure:scATAC_mEBs_rep1_day21_10XlaneA_R1
md5sum
7381ede76ac9f8022579f48faec2eab4
Content MD5sum
aa42eb48519638c031134a22a50e38f8
File Size
3.4 GB
Submitted File Name
/net/shendure/vol8/projects/JBL/GEO_scATAC_EB_correction_nobackup/scATAC_mEBs/scATAC_mEBs_d21_crispri_rep1_lane_a_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NextSeq 500
Sequencing Run
1
Flowcell ID
H3JK7BGXG
Lane
1
Sequencing Kit
NextSeq 500/550 High-Output v2.5 Kit
Illumina Read Type
R1
Average Read Length
50
Read Count
101261224

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10XlaneA), male, Mus musculus WD44

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jay Shendure, UW
1.6 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI8994UMQU, IGVFFI3937KXBX, IGVFFI4010FPRN, IGVFFI4853BUVD
Jay Shendure, UW
856 B
validated

Attribution

Award
HG011966
Principal Investigator(s)
Contact P.I.
Jay Shendure
Lab
Jay Shendure, UW